Package: cometExactTest 0.1.5

Max Leiserson

cometExactTest: Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm

An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.

Authors:Max Leiserson [aut, cre], Hsin-Ta Wu [aut], Fabio Vandin [ctb], Vivian Hsiao [ctb], Benjamin Raphael [ctb]

cometExactTest_0.1.5.tar.gz
cometExactTest_0.1.5.zip(r-4.5)cometExactTest_0.1.5.zip(r-4.4)cometExactTest_0.1.5.zip(r-4.3)
cometExactTest_0.1.5.tgz(r-4.5-x86_64)cometExactTest_0.1.5.tgz(r-4.5-arm64)cometExactTest_0.1.5.tgz(r-4.4-x86_64)cometExactTest_0.1.5.tgz(r-4.4-arm64)cometExactTest_0.1.5.tgz(r-4.3-x86_64)cometExactTest_0.1.5.tgz(r-4.3-arm64)
cometExactTest_0.1.5.tar.gz(r-4.5-noble)cometExactTest_0.1.5.tar.gz(r-4.4-noble)
cometExactTest_0.1.5.tgz(r-4.4-emscripten)cometExactTest_0.1.5.tgz(r-4.3-emscripten)
cometExactTest.pdf |cometExactTest.html✨
cometExactTest/json (API)

# Install 'cometExactTest' in R:
install.packages('cometExactTest', repos = c('https://mdml.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.30 score 1 scripts 288 downloads 2 mentions 1 exports 16 dependencies

Last updated 7 years agofrom:0426f0cca1. Checks:12 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 06 2025
R-4.5-win-x86_64OKMar 06 2025
R-4.5-mac-x86_64OKMar 06 2025
R-4.5-mac-aarch64OKMar 06 2025
R-4.5-linux-x86_64OKMar 06 2025
R-4.4-win-x86_64OKMar 06 2025
R-4.4-mac-x86_64OKMar 06 2025
R-4.4-mac-aarch64OKMar 06 2025
R-4.4-linux-x86_64OKMar 06 2025
R-4.3-win-x86_64OKMar 06 2025
R-4.3-mac-x86_64OKMar 06 2025
R-4.3-mac-aarch64OKMar 06 2025

Exports:comet_exact_test

Dependencies:clidplyrfansigenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr